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Microarray Basics


»Page 1: Microarrays as a Gene Expression Tool
Page 2: Microarray vs. Macroarrays
Page 3: Microarray Nomenclature
Page 4: Design of Microarray Experiments
Page 5: References

Microarrays as a Gene Expression Tool

Gene expression tools in molecular biology have changed significantly from the days of analyzing one gene or gene pathway at a time to the evaluation of gene expression at the level of the whole genome using microarrays. Like Northern and Southern analysis, microarrays allow relative quantitation of gene expression. Similar to Northerns, microarrays require the immobilization of nucleic acids on a solid support, and the subsequent binding of sequences complementary to these nucleic acids to measure gene expression levels. However, microarrays differ from their predecessors in the following features:

  • Northerns and Southerns are limited to the study of a single or a few genes at a time, while microarrays allow the analysis of hundreds or thousands of genes with the possibility of obtaining complete genome expression in a single experiment.
  • Northern membranes immobilize the “unknown” biological sample being studied (target) on the solid support, while with microarrays the “known” sequence (probe) for a gene is bound to the support.
Figure 1.

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